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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949356.1_cds_XP_016490271.1_80707
CDS Infomation

[gene=LOC107810053] [db_xref=GeneID:107810053] [protein=LOW QUALITY PROTEIN: NAD-dependent protein deacetylase SRT1] [partial=3'] [transl_except=(pos:694..696,aa:Other)] [protein_id=XP_016490271.1] [location=join(33060..33158,34809..34838,34929..35021,36105..36224,36859..36959,37162..37270,37893..37972,38150..38219,38956..39039,39947..40043,40626..40708,41608..41675,42349..>42454)] [gbkey=CDS]
Sequence

ATGTCTTTAGGTTATGCTGAGAAACTCTCATTTATAGAAGATGTGGGCAATGTTGGAATG
ACTGAATATTTCGACCCACCTTACATTTTGCAAGACAAAATTGAGAGACTTGCTGTGATG
ATACAAAAGAGTAAGCATTTAGTTGTGTTTACTGGAGCAGGAATATCCACGTCTTGTGGT
ATACCTGATTTTCGTGGTCCCAAGGGCATTTGGACTCTTCAGAGAGAAGGGAAAGCGCTA
CCAGAAGCATCTTTGCCATTTCACCGTGCAACGCCGAGCATGACACACATGGCCCTAGTT
GAACTAGAGAAGGCGGGTTTTCTAAAGTTTATTATAAGCCAGAACATTGATGGCCTGCAT
CTTCGCTCTGGAATTCCAAGGAAGAAGCTTGCAGAATTACATGGGGATTCTTTTATGGAA
CTATGCCCTTCTTGCGGAATTGAGTATATGAGGGATTTTGAAATAGAAACTATTGGGTTG
AAGGAAACTGCACGACGTTGTTCCAAGGTGGGCTGTGGTGCGAGACTTAGAGACACAGTT
CTTGACTGGGAGGATGCTCTACCTCCAAAGGAGATGAATCCAGCTGAGAGGCACTGCAAA
ATGGCTGATGTTGTGCTATGTCTGGGAACAAGTTTGCAGATCACCCCTGCCTGTAATTTG
CCTCTAAAATCACTCAAAGGTGGTGGAAAGNACTAGTGGCCTCTCTTATTTCCCTCTTCC
ATTATTTTGCAGAAAACACCCAAGGACAAGAAAGCAACCATGCTGATTCATGGCCTTGTA
GACAAGGTAATTGCAGGAGTCATGGAATTCCTTAGTCTGCGAATCCCACCATTTATTAGA
ATTGATCTTCTCCAGACCATTTTTACTCAGGCCTTAAGTCTTGATAAAAAATATGTAAAT
TGGACCCTTACTGTAGCAAGTGTCCATGGAAATAGGGCACCATTGCCTTTTATCAAATCT
GTAGAGGTTTCTTTTTCAGAATGTCAAAACATGAAAGCAACTGTTCTGCATAAACAACCT
CTTCAGCTAAAAAGGCGGACGGTTAAGACTGCAAATCCTTTTAACGTTAAGTTGAAATTG
AACTTCAGTGATGGTTGCATGTGTTCATCGGCTGAAATCAAGATTCCAGTTGATTTTCAG

Peptide Sequence

PEP ID

XP_016490271.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: NAD-dependent protein deacetylase SRT1, partial [Nicotiana tabacum]
Sequence

MSLGYAEKLSFIEDVGNVGMTEYFDPPYILQDKIERLAVMIQKSKHLVVFTGAGISTSCG
IPDFRGPKGIWTLQREGKALPEASLPFHRATPSMTHMALVELEKAGFLKFIISQNIDGLH
LRSGIPRKKLAELHGDSFMELCPSCGIEYMRDFEIETIGLKETARRCSKVGCGARLRDTV
LDWEDALPPKEMNPAERHCKMADVVLCLGTSLQITPACNLPLKSLKGGGKXXWPLLFPSS
IILQKTPKDKKATMLIHGLVDKVIAGVMEFLSLRIPPFIRIDLLQTIFTQALSLDKKYVN
WTLTVASVHGNRAPLPFIKSVEVSFSECQNMKATVLHKQPLQLKRRTVKTANPFNVKLKL
NFSDGCMCSSAEIKIPVDFQ

Transcript Sequence

Gene sequence data has not been registered.